- StringDBReport class for gene set visualization and reporting
- make sure da directions categories are always retained and ordered correctly
- more flexible
volcano_deplot fold_change_modeparameter for heatmap to only show fold-change instead of split tiles- implement
RunInfoutility to fetch information about previous runs - bugfix passing
axtokompot.plot.embedding - implemented
mgroupsinkompot.plot.embeddingto plot multiple groupings - implement group-wise differential expression through
groupsparameter inkompot.compute_differential_expression - also return and store uncertainty estimates (stds) in de analysis
- also return and store z-scores in de analysis
- implement underrepresentation filtering for de analaysis
plot.embeddingscanpy wrapper can now plot multiple layer- make sure modified anndata is writable (use JSON for run info in
.uns) - option to store posterior covariance matrix in differential expression anndata function