What's Changed
- feat(l2g): add LocusToGeneModelTuningStep for pre-split CV and hyperparameter tuning by @addramir in #1230
- chore: pre-commit autoupdate by @pre-commit-ci[bot] in #1253
- build(deps-dev): update mypy requirement from <2.2,>=1.13 to >=1.13,<2.3 by @dependabot[bot] in #1255
- build(deps-dev): update mkdocs requirement from <1.6.0,>=1.5.3 to >=1.5.3,<1.7.0 by @dependabot[bot] in #1256
- feat(ess): add effective sample size by @project-defiant in #1263
- feat(ccs): add case control study validation by @project-defiant in #1264
- feat(fine-mapping): planner for fine-map study combinations. by @project-defiant in #1265
- feat(qc): relax sumstats QC thresholds for exome/wgs-gwas studies by @addramir in #1269
- feat(eqtl catalogue r8): prepare for r8 release by @project-defiant in #1276
- feat(container): add gcs and harmonisation script by @project-defiant in #1278
- fix: dockerfile python version for gcloud by @Daniel-Considine in #1280
- fix(eqtl catalogue): r8 ingestion by @project-defiant in #1277
- fix: dockerfile update to account for batch env override by @Daniel-Considine in #1281
- fix(qc): raise DUPLICATED_STUDYLOCUS_ID and make duplicate flagging deterministic by @addramir in #1274
- fix(cluster): force HTTP/1.1 for git, working around a GitHub defect by @d0choa in #1288
- fix: use git config --system in the cluster init action by @d0choa in #1289
- fix(qc): run the study locus duplicate check after the other flags by @addramir in #1290
- fix(l2g): load a model from a GCS directory by @addramir in #1284
- Release/v3.4.0 by @project-defiant in #1302
Full Changelog: v3.3.0...v3.4.0