What's Changed
- fix(study_locus_valiation): ensure the transQtlColumn is overwritten when reading from parquet @project-defiant in #990
- feat: new Loss-of-Function variant data from OTAR2075 by @vivienho in #991
- chore(docs): update _ukb_ppp_eur.md by @buniello in #995
- fix(dataset):
filtermaintains instance attributes by @ireneisdoomed in #996 - feat(l2gprediction): add score explanation based on features by @ireneisdoomed in #939
- build(deps): update google-cloud-secret-manager requirement from <2.13.0,>=2.12.6 to >=2.12.6,<2.24.0 by @dependabot in #994
- chore: pre-commit autoupdate by @pre-commit-ci in #988
- fix(l2g): direct model path to hf repo when none and align training data filename by @ireneisdoomed in #997
- chore(shap): sample background dataset to make explanation faster by @ireneisdoomed in #998
- feat: local dataproc cluster settings udpate by @project-defiant in #999
- fix: dev release process by @project-defiant in #992
- fix: foldx column name fix by @DSuveges in #1005
- chore(trainer): sample train set to base model importances on by @ireneisdoomed in #1001
- fix: solve
NULLs found invariantEffectstruct of the variant index by @vivienho in #1003 - fix: qemu libc segfault during docker build action by @project-defiant in #1004
- fix: change posterior filter by @xyg123 in #1006
- chore: pre-commit autoupdate by @pre-commit-ci in #1002
- chore(deps): bump docker/setup-qemu-action from 3.4.0 to 3.6.0 by @dependabot in #1011
- chore(deps): bump python-semantic-release/publish-action from 9.19.1 to 9.21.0 by @dependabot in #1010
- build(deps): update google-cloud-storage requirement from <3.1.0,>=2.14.0 to >=2.14.0,<3.2.0 by @dependabot in #1009
- chore(l2g): make shap optional by @ireneisdoomed in #1012
- feat(l2g): update params after fine tuning for the new training data by @ireneisdoomed in #1014
- feat(l2g): download specific model version from hub by @ireneisdoomed in #1015
- chore: trigger release process by @github-actions in #993
Full Changelog: v2.1.0...v2.2.0