pypi genome-spy-python 0.3.0

latest releases: 0.7.0, 0.6.0, 0.5.0...
one month ago

Changed

  • Replace the P53 example dataset with 34 protein sequences aligned with MAFFT L-INS-i.
  • Update the P53 gallery with alignment-based conservation, gap-free fractions, and sequence logos.
  • Build the brush notebook progressively and add an effect-size zero baseline in the notebook and gallery.

Dataset migration

The p53_sequence_comparison dataset now contains FASTA text instead of the previous JSON table mapping. Load it with load_dataset("p53_sequence_comparison", as_format="text"). Code expecting the old prepared tables must be updated.

GenomeSpy Core remains at 0.87.0.

Full changelog: https://github.com/genome-spy/genome-spy-python/blob/v0.3.0/CHANGELOG.md

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