1.1 (September 08, 2023)

Add compatibility with GPU based tractography. Speeds
up the Mahalanobis cleaning step. Removes interface for
loading ITK files and using them as maps in pyAFQ, because
it did not work in all cases. Adds more examples and updates
docs to a new system. Other minor fixes.

• [FIX] delete folders in AFQ derivatives when clobbering (#1015)
• Update the pypi action so that it runs on latest ubuntu. (#1012)
• NF: Adds fetcher for cerebellar peduncle waypoint ROIs. (#968)
• [ENH] Bundle montage (#994)
• Slf123new (#997)
• (#1011)
• [FIX] fix a small bug in the curvature code (#985)
• added more documentation of dependencies (#1002)
• [Doc] add an example of single subject rois; reduce example time (#999)
• RF: Set dask as the default paralellization engine. (#1009)
• [ENH] add OR pediatric bundle definition, make it easier to add future pediatric bundles (#1007)
• DOC: Myst (#992)
• [ENH] Much faster mahal cleaning (#982)
• [FIX] Remove itk (#981)
• Update setup.cfg with newer pybids (#991)
• Update plot_viz.py (#993)
• Installation with quotes (#988)
• [ENH] update dipy (#986)
• [ENH] Adds export_up_to, adds some minor fixes here and there (#977)
• [ENH] allow the setting of number of voxels for a seed mask (#976)
• [ENH] Calculate new curvature metric manually (#973)
• [FIX] split GPU pyafq docker builds into differnet actions (#975)
• [ENH] add CUDA 12 compat to GPU tractography (#972)
• [ENH] allow GPU docker file to play nice with singularity (#971)
• [ENH/FIX] Improvements for finding the Visual Pathway (#953)
• Adds back reference documentation to reference section. (#964)
• Starting doc overhaul (#948)
• [ENH] add gpu tracking to pyAFQ (#962)