ornladios/ADIOS2 v2.10.0-rc1 on GitHub

What's Changed

ci: migrate to almalinux, cuda base image by @vicentebolea in #3484
ci: update kokkos to 3.7 by @vicentebolea in #3490
codeowners: added code owners file by @vicentebolea in #3496
Hdf5 vol support will require latest hdf5 1.14 by @guj in #3516
Bump numpy from 1.21.6 to 1.22.0 in /docs by @dependabot in #3535
Bump cryptography from 38.0.2 to 39.0.1 in /docs by @dependabot in #3534
Release 29 by @dmitry-ganyushin in #3545
Enable Linux Emulation build (Power8, IBM XL) by @vicentebolea in #3537
Setting code owners for the GPU files by @anagainaru in #3561
Release 29 by @vicentebolea in #3573
Allowing Put/Get to receive Kokkos Views with HIP backend by @anagainaru in #3571
Prototype DAOS engine by @eisenhauer in #3576
CODEOWNERS: update codeowner file by @vicentebolea in #3581
shellcheck: add shellcheck ci check by @vicentebolea in #3582
Build scripts for ADIOS2 with CUDA and Kokkos backend by @anagainaru in #3579
Disable emu tests by @vicentebolea in #3583
cmake: set correct soname by @vicentebolea in #3585
TestBPChangingShapeWithinStep without and with various compressors by @pnorbert in #3577
add release files by @vicentebolea in #3570
Heat Transfer Example: MPI Datatype by @ax3l in #3593
test,install: paramaterize adios2_DIR by @vicentebolea in #3586
ci,ascent: enable ascent builds by @vicentebolea in #3610
ci: use nvcc_wrapper in adiosKokkos by @vicentebolea in #3623
Adding SYCL support to the Kokkos backend by @anagainaru in #3621
Bump requests from 2.28.1 to 2.31.0 in /docs by @dependabot in #3628
Fix flaky MSMPI installation in windows builds by @vicentebolea in #3627
docs: update whatsnew by @vicentebolea in #3634
ci,olcf,crusher: enable Crusher CI by @vicentebolea in #3620
ci,crusher: minor tweaks by @vicentebolea in #3635
Ascent,CI: do not report sync script build by @vicentebolea in #3637
replaced uint with size_t by @guj in #3640
crusher,ci: set unique env per pipeline by @vicentebolea in #3644
Update documentation for the GPU-aware functionality by @anagainaru in #3639
work around with include <unistd.h> on windows by @guj in #3652
Bug fix for Kokkos applications without GPU backend by @anagainaru in #3654
An effort to make profiler more user friendly by @guj in #3660
Bump cryptography from 39.0.1 to 41.0.0 in /docs by @dependabot in #3650
ci: remove power8 emulated builds by @vicentebolea in #3667
ci,ascent: disable install tests by @vicentebolea in #3673
Tweaks for BP5 on windows. by @eisenhauer in #3682
Fix memory leak when there are Joined Arrays in streaming mode by @eisenhauer in #3684
Fix for the issue #3646. by @dmitry-ganyushin in #3687
cmake,evpath: namespace modules install dir by @vicentebolea in #3689
Ci rework gcc builds by @scottwittenburg in #3631
added gitattributes file by @vicentebolea in #3698
Update files with new EOL by @vicentebolea in #3699
build(deps): bump cryptography from 41.0.0 to 41.0.2 in /docs by @dependabot in #3697
ci,mpich: disable Sz|Zfp flaky tests by @vicentebolea in #3702
build(deps): bump pygments from 2.14.0 to 2.15.0 in /docs by @dependabot in #3704
ci,cmake: cleanup scripts subdirectory by @vicentebolea in #3625
cmake: moved logic to enable h5vol to detectoptions.cmake by @vicentebolea in #3701
build(deps): bump certifi from 2022.12.7 to 2023.7.22 in /docs by @dependabot in #3712
ci: increase windows timeout defsync and DataWrite by @vicentebolea in #3726
format,ci: update clang-format to clang16 by @vicentebolea in #3722
Enable Flush Test for BP5 by @eisenhauer in #3683
Use ccache in github actions builds by @scottwittenburg in #3705
ci: Fix conditional expression syntax to fix cache save by @scottwittenburg in #3730
ci: work around bug in actions/cache by @scottwittenburg in #3731
build(deps): bump cryptography from 41.0.2 to 41.0.3 in /docs by @dependabot in #3733
Version constants plus functions to retrieve list of ... by @pnorbert in #3676
ci: add libcurl4 to all ubuntu images by @scottwittenburg in #3734
ci: update release instructions by @vicentebolea in #3738
ci: add downloads readthedocs by @vicentebolea in #3739
cmake: fix evpath plugins install path by @vicentebolea in #3737
Remote Data access via Get() or Transport by @eisenhauer in #3740
readthedocs: remove sys pkgs; use current ADIOS2 by @vicentebolea in #3743
Fix: Static Builds Against C-Blosc2 by @ax3l in #3715
CI: add two static builds by @vicentebolea in #3749
Upstream ffs by @eisenhauer in #3755
Update Readme.md with community section by @vicentebolea in #3700
cmake,readthedocs: update python enable instructions by @vicentebolea in #3713
cmake: correct info.h installation path by @vicentebolea in #3758
Korvo upstream by @eisenhauer in #3761
cmake: resolve cmake python deprecation warning by @vicentebolea in #3764
Update kwsys by @vicentebolea in #3765
ci: add mgard dependency to spack builds by @vicentebolea in #3753
Misc fixes by @vicentebolea in #3768
Add automated vulnerability code analysis using CodeQL. by @vicentebolea in #3606
cmake: correct ADIOS2_Blosc2_PREFER_SHARED behavior by @vicentebolea in #3767
match type of timestep for h5 engine to size_t (same as adios Variabl… by @guj in #3776
ci: Create static minimal build by @vicentebolea in #3760
Remove unused SelectionType values by @eisenhauer in #3784
Update ADIOS2 HDF5 VOL with basic set of capability flags by @jhendersonHDF in #3632
gha,ci: update checkout to v4 by @vicentebolea in #3789
ci: Add HDF5 to a windows build by @scottwittenburg in #3732
Fixup local var reading by block with test, master branch by @eisenhauer in #3787
Add MinBlocksInfo to BP5 writer engine by @eisenhauer in #3794
yaml-cpp: support 0.8.0 version by @vicentebolea in #3799
Delete experimental examples by @spyridon97 in #3800
Remove BP5 BetweenStepPairs variable that hides Engine.h counterpart by @eisenhauer in #3803
WIP: Reader-side Profiling by @eisenhauer in #3778
Fix the ADIOS_USE_{} variable names to use ADIOS2 by @anagainaru in #3807
Pass Array Order of reader to remote server for proper Get() operation by @eisenhauer in #3810
Fix abs/rel step in BP5 DoCount by @eisenhauer in #3812
FFS upstream master-branch by @eisenhauer in #3815
added support to query BP5 files by @guj in #3809
install: export adios2 device variables by @vicentebolea in #3819
ci: fix codeql ignore path by @vicentebolea in #3772
Add Memory Selection to SST, and prototype a mechanism for running st… by @eisenhauer in #3823
Remote test redux by @eisenhauer in #3830
Tweak Remote class and test multi-threaded file remote access by @eisenhauer in #3834
MPI: add timeout for conf test for MPI DataPlane by @vicentebolea in #3848
cmake: update minimum cmake to 3.12 by @vicentebolea in #3849
MPI DataPlane: do not call MPI_Init internally by @vicentebolea in #3847
Fix destdir install test by @vicentebolea in #3850
Organize and add examples by @spyridon97 in #3820
Blosc2 USE ON: Fix Module Fallback by @ax3l in #3774
BP5Serializer: handle local variables that use operators by @caitlinross in #3859
Update examples by @spyridon97 in #3856
bug fix: syntax error in json output by @guj in #3857
Remove Slack as a contact mechanism by @eisenhauer in #3866
Remote Server Improvements by @eisenhauer in #3862
Fix hip example compilation error by @spyridon97 in #3865
new attempt to commit query support of local array. by @guj in #3868
cmake: link to MPI::MPI_Fortran using INTERFACE by @caitlinross in #3853
Backports from release_29 by @vicentebolea in #3858
Backport 3877 to master by @vicentebolea in #3882
Fix MPI Data plane cohort handling by @vicentebolea in #3588
Testing writing null blocks without affecting the read by @anagainaru in #3878
docs: update new_release.md by @vicentebolea in #3892
cmake: find threads package first by @vicentebolea in #3893
Add tutorials by @spyridon97 in #3880
examples,hip: use find_package(hip) once in proj by @vicentebolea in #3896
Add Remote "-status" command to see if a server is running and where by @eisenhauer in #3911
Defining and computing derived variables by @anagainaru in #3816
Fix printing issue in perfstub thirdparty code by @anagainaru in #3913
ci,crusher: increase supported num branches by @vicentebolea in #3902
Change install directory of Gray scott files by @spyridon97 in #3905
ci: add shellcheck coverage to source and testing by @vicentebolea in #3915
Change install directory of Gray scott files again by @spyridon97 in #3917
SST with GPU support by @anagainaru in #3918
ci: Set openmpi and openmp parameters to make an efficient use of the CI by @vicentebolea in #3908
Cleanup server output a bit by @eisenhauer in #3914
ReadMe.md: Mention 2.9.2 release by @eschnett in #3921
ci: use mpich built with ch3:sock to speed up tests by @scottwittenburg in #3883
Dataman with GPU support by @anagainaru in #3928
CI Contract Build examples with external ADIOS by @spyridon97 in #3906
Revert "Fix printing issue in perfstub thirdparty code" by @anagainaru in #3943
Perf stubs upstream by @eisenhauer in #3944
Fix the HIP CMAKE issues to run on Frontier by @anagainaru in #3931
Set the compiler for the Kokkos DataMan example by @anagainaru in #3946
Fix MATLAB bindings for MacOS by @tomgade09 in #3950
Delete VTK code in examples by @spyridon97 in #3952
Enable shell check scripts for existing scripts by @spyridon97 in #3940
Move useful docs from ADIOS2-examples to ADIOS2 by @spyridon97 in #3939
Use adios2_mode_readRandomAccess in matlab open to make it work for BP5 by @pnorbert in #3956
Adapt libfabric dataplane of SST to Cray CXI provider by @franzpoeschel in #3672
Update readme for heat transfer example with new location and build i… by @pnorbert in #3904
ci: fix false negative asan checks by @scottwittenburg in #3957
adios2::core::ADIOS: Initialize new IO objects with config file by @spyridon97 in #3955
MDR Operator by @pnorbert in #3826
fix for ASAN issue related to JoinedDimArray handling in BP5 deserializer by @pnorbert in #3963
Have HDF5 write raise error if operator(s) requested by @rupertnash in #3951
Http connector by @dmitry-ganyushin in #3890
Add pip packaging by @scottwittenburg in #3960
pip: also run pypi upload job on workflow_dispatch by @scottwittenburg in #3967
Campaign manager by @pnorbert in #3932
update copyright.txt to include recent kitware authors by @vicentebolea in #3965
Bug fix building ADIOS2 without the campaign example by @anagainaru in #3969
Several fixes for ASAN issues by @eisenhauer in #3959
SST ASAN buffer fix by @eisenhauer in #3972
python: Implement Python high level API in python by @vicentebolea in #3938

New Contributors

@jhendersonHDF made their first contribution in #3632
@spyridon97 made their first contribution in #3800
@tomgade09 made their first contribution in #3950
@rupertnash made their first contribution in #3951

Full Changelog: v2.9.2...v2.10.0-rc1