What's Changed
- FIX: Typo in sorted(..., reverse=True) call by @araikes in #1211
- MAINT: Update contributor affiliation in
CONTRIBUTORS.mdby @oesteban in #1214 - CI: flake8 → ruff check by @DimitriPapadopoulos in #1212
- DOC: Add changelog to documentation by @oesteban in #1217
- ENH: Revise summary stats extraction and include controlled roundings by @oesteban in #1219
- ENH: Adds diffusion-related IQMs. by @arokem in #1131
- ENH: Add computation of spiking voxels mask and percent IQMs by @oesteban in #1224
- ENH: Add FA-based IQMs (nans percentage and degenerate percentage) by @oesteban in #1225
- ENH: Add new IQM for DWI -- NDC by @oesteban in #1226
- ENH: Use MAD for robust estimation of sigma in the CC mask by @oesteban in #1228
- ENH: Integrate PIESNO noise mask and sigma estimation by @oesteban in #1227
- ENH: Noise floor estimated with PCA (
dwidenoise) as an IQM by @oesteban in #1229 - ENH: Move from DTI to DKI with multishell data by @oesteban in #1230
- ENH: Add b-vector angular deviations as IQMs by @oesteban in #1233
- FIX: Duplicate node in anatomical workflow by @oesteban in #1234
- ENH: Improve error handling and logging by @oesteban in #1238
- FIX: Avert costly
BIDSLayout.__repr__calls when saving config by @oesteban in #1239 - FIX: Exclude DWI runs with insufficient orientations or missing bvals by @oesteban in #1240
- FIX: Handle
NUMEXPR_MAX_THREADSlikeOMP_NUM_THREADSby @oesteban in #1241 - FIX: Drift should not be estimated when less than three low-b volumes present by @oesteban in #1242
- FIX: Sloppy merge by @oesteban in #1243
- FIX: Revise config save/load and update inputs after dropping by @oesteban in #1245
- ENH: Expose a command-line option for minimum DWI volumes by @oesteban in #1249
- FIX: Skip short BOLD runs that break outlier detection by @effigies in #1120
- MAINT: Prevent pandas-originating deprecation warning by @oesteban in #1251
- ENH: Improve logging of runtime by @oesteban in #1253
- ENH: Improve documentation and logging of SynthStrip's model by @oesteban in #1254
- MAINT: Clean up more
FutureWarningissued by pandas by @oesteban in #1257 - ENH: Mechanism to protect config's fields and write out config by @oesteban in #1258
- FIX: Make sure new logs and config file output are compatible with parallel processes by @oesteban in #1259
- FIX: Select filters if modalities are selected by @oesteban in #1261
- FIX: Address issues that had broken the group reports by @oesteban in #1262
- FIX: Enable group reports for DWI by @oesteban in #1266
- Removed pre-commit from development dependencies by @zvi-quantivly in #1269
- FIX: Finalized naming and connection of DWI IQMs by @oesteban in #1272
- MAINT: Added ruff to development dependencies by @zvi-quantivly in #1271
- FIX: Calculation of trivial shells by @oesteban in #1276
- STY: Applied ruff formatting by @zvi-quantivly in #1273
- ENH: Annotate nodes with
n_procsto allow safe parallelization by @oesteban in #1277 - FIX: Remove DataLad as a node by @oesteban in #1278
- STY: Reformat with ruff by @oesteban in #1279
- Fail for non-formatted code by @zvi-quantivly in #1274
- REL: 24.0.0rc8 by @oesteban in #1280
- FIX: Bug in toml loader crashing with mixed arrays in config by @oesteban in #1281
New Contributors
- @araikes made their first contribution in #1211
- @zvi-quantivly made their first contribution in #1269
Full Changelog: 23.1.1...24.0.0