nextstrain/nextclade_data 2026-10-06--17-37-18Z on GitHub

This release contains changes for datasets:

Bundibugyo ebolavirus (nextstrain/orthoebolavirus/bdbv)

Update reference tree with more recent genomes
Include putative ADAR edit-detection. Cluster of 3 or more T->C mutations will now be highlighed.

2026 Annual update: added new lineages to the classification system as determined by the scientific committee.
Updated representative tree sequences to reduce assignment errors.
Outgroup sequences are now labeled unassigned instead of Outgroup.
Restored country coloring and the map using Pathoplexus country metadata where available.
Most reference-tree tips now use Pathoplexus accessions (PP_...) as their identifiers.
Corrected placement masks to match each serotype's GFF3 coding bounds and reference length.
New lineages: 1V_A.1, 1V_A.2, 1V_D.1.4, 1V_F.1, 1V_F.2

2026 Annual update: added new lineages to the classification system as determined by the scientific committee.
Updated representative tree sequences to reduce assignment errors.
Outgroup sequences are now labeled unassigned instead of Outgroup.
Restored country coloring and the map using Pathoplexus country metadata where available.
Most reference-tree tips now use Pathoplexus accessions (PP_...) as their identifiers.
Corrected placement masks to match each serotype's GFF3 coding bounds and reference length.
New lineages: 2III_C.3, 2III_D.1.2.1, 2III_D.1.2.2, 2III_D.1.2.3, 2II_D.4.1, 2II_D.4.2, 2II_F.1.1.10, 2II_F.1.1.2.1, 2II_F.1.1.2.2, 2II_F.1.1.2.3, 2II_F.1.1.9, 2V_F

2026 Annual update: added new lineages to the classification system as determined by the scientific committee.
Updated representative tree sequences to reduce assignment errors.
Outgroup sequences are now labeled unassigned instead of Outgroup.
Restored country coloring and the map using Pathoplexus country metadata where available.
Most reference-tree tips now use Pathoplexus accessions (PP_...) as their identifiers.
Corrected placement masks to match each serotype's GFF3 coding bounds and reference length.
New lineages: 3III_B.5, 3I_C.2.1, 3I_C.2.2, 3I_C.2.3

2026 Annual update: added new lineages to the classification system as determined by the scientific committee.
Updated representative tree sequences to reduce assignment errors.
Outgroup sequences are now labeled unassigned instead of Outgroup.
Restored country coloring and the map using Pathoplexus country metadata where available.
Most reference-tree tips now use Pathoplexus accessions (PP_...) as their identifiers.
Corrected placement masks to match each serotype's GFF3 coding bounds and reference length.
New lineages: 4II_A.1.3, 4II_B.3