nextstrain/nextclade_data 2025-10-22--18-11-36Z

on GitHub

This release contains changes for datasets:

• Influenza A H1N1pdm HA (nextstrain/flu/h1n1pdm/ha/CY121680)
• Influenza A H1N1pdm HA (nextstrain/flu/h1n1pdm/ha/MW626062)
• Influenza A H3N2 HA (nextstrain/flu/h3n2/ha/CY163680)
• Influenza A H3N2 HA (nextstrain/flu/h3n2/ha/EPI1857216)
• Influenza B Victoria HA (nextstrain/flu/vic/ha/KX058884)
• Mumps MuV Genotypes (SH gene 315nt region) (nextstrain/mumps/sh)
• Mumps MuV Genotypes (Full genome) (nextstrain/mumps/genome)

Influenza A H1N1pdm HA (nextstrain/flu/h1n1pdm/ha/CY121680)

• make subclade the default clade like feature, while including a column subclade into the tabular output to maintain backwards compatibility of other pipelines. The previous clade that hasn't been updated in for 2y as now legacy-clade.

Influenza A H1N1pdm HA (nextstrain/flu/h1n1pdm/ha/MW626062)

• make subclade the default clade like feature, while including a column subclade into the tabular output to maintain backwards compatibility of other pipelines. The previous clade that hasn't been updated in for 2y as now legacy-clade.

Influenza A H3N2 HA (nextstrain/flu/h3n2/ha/CY163680)

• add designation of J.2.4.1
• make subclade the default clade like feature, while including a column subclade into the tabular output to maintain backwards compatibility of other pipelines. The previous clade that hasn't been updated in for 2y as now legacy-clade.

Influenza A H3N2 HA (nextstrain/flu/h3n2/ha/EPI1857216)

• add designation of J.2.4.1
• make subclade the default clade like feature, while including a column subclade into the tabular output to maintain backwards compatibility of other pipelines. The previous clade that hasn't been updated in for 2y as now legacy-clade.

Influenza B Victoria HA (nextstrain/flu/vic/ha/KX058884)

• make subclade the default clade like feature, while including a column subclade into the tabular output to maintain backwards compatibility of other pipelines. The previous clade that hasn't been updated in for 2y as now legacy-clade.

Mumps MuV Genotypes (SH gene 315nt region) (nextstrain/mumps/sh)

Remove the duplicate "MuV genotype" column and only use "Clade".

Mumps MuV Genotypes (Full genome) (nextstrain/mumps/genome)

Remove the duplicate "MuV genotype" column and only use "Clade".