github nextstrain/nextclade_data 2025-08-02--08-55-17Z
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latest releases: 2025-08-25--09-00-35Z, 2025-08-14--12-26-14Z, 2025-08-12--18-07-15Z...
one month ago

This release contains changes for datasets:

  • SARS-CoV-2 (nextstrain/sars-cov-2/wuhan-hu-1/orfs)
  • SARS-CoV-2 (BA.2.86) (nextstrain/sars-cov-2/BA.2.86)
  • Measles N450 (WHO-2012) (nextstrain/measles/N450/WHO-2012)

SARS-CoV-2 (nextstrain/sars-cov-2/wuhan-hu-1/orfs)

  • Add all 185 Pango lineages newly designated between 2025-06-09 and 2025-07-30. Unfold below to see a list of all newly included lineages with their designation dates:
Newly included lineages, with designation date in parentheses
  • PE.1.1 (2025-06-12)
  • PE.1.3 (2025-06-12)
  • PE.1.4 (2025-06-12)
  • PE.1.5 (2025-06-12)
  • MC.10.2.3 (2025-06-12)
  • XEC.27.1 (2025-06-12)
  • XEC.27.2 (2025-06-12)
  • NY.16.2 (2025-06-12)
  • XEC.23.1 (2025-06-12)
  • MC.9.3 (2025-06-12)
  • XEC.2.7 (2025-06-12)
  • XEC.2.8 (2025-06-12)
  • XEC.2.9 (2025-06-12)
  • XEC.2.10 (2025-06-12)
  • XEC.41 (2025-06-12)
  • PZ.1 (2025-06-13)
  • QA.1 (2025-06-13)
  • QA.2 (2025-06-13)
  • QA.3 (2025-06-13)
  • QA.4 (2025-06-13)
  • QA.5 (2025-06-13)
  • QA.6 (2025-06-13)
  • QA.7 (2025-06-13)
  • NT.3 (2025-06-13)
  • NT.2.1 (2025-06-13)
  • NT.4 (2025-06-13)
  • NT.5 (2025-06-13)
  • NT.6 (2025-06-13)
  • LF.7.1.12 (2025-06-13)
  • LF.7.1.13 (2025-06-13)
  • QB.1 (2025-06-13)
  • XFP.1 (2025-06-14)
  • XFG.4 (2025-06-14)
  • XFG.5 (2025-06-14)
  • XFG.6 (2025-06-14)
  • NY.18 (2025-06-14)
  • NY.18.1 (2025-06-14)
  • XDY.8 (2025-06-15)
  • XDY.9 (2025-06-15)
  • XDY.10 (2025-06-15)
  • XDY.11 (2025-06-15)
  • XDY.12 (2025-06-15)
  • XDY.12.1 (2025-06-15)
  • XDY.12.1.1 (2025-06-15)
  • XFG.7 (2025-06-16)
  • PY.1.1 (2025-06-16)
  • QC.1 (2025-06-17)
  • QC.2 (2025-06-17)
  • QC.3 (2025-06-17)
  • QC.4 (2025-06-17)
  • QC.5 (2025-06-19)
  • PQ.17 (2025-06-28)
  • PQ.10.1 (2025-06-28)
  • PQ.2.1 (2025-06-28)
  • PQ.13.1 (2025-06-28)
  • PY.4.1 (2025-07-02)
  • PY.1.1.1 (2025-07-02)
  • PY.1.2 (2025-07-03)
  • PY.1.3 (2025-07-03)
  • PY.1.4 (2025-07-03)
  • PY.1.4.1 (2025-07-03)
  • XFP.2 (2025-07-08)
  • XFP.1.1 (2025-07-08)
  • XFG.8 (2025-07-08)
  • XFG.9 (2025-07-08)
  • XFG.10 (2025-07-08)
  • XFQ (2025-07-08)
  • XFG.11 (2025-07-08)
  • XFG.12 (2025-07-08)
  • XFG.13 (2025-07-08)
  • XFG.3.2 (2025-07-08)
  • XFG.3.3 (2025-07-08)
  • XFG.3.4 (2025-07-08)
  • XFG.3.4.1 (2025-07-08)
  • XFG.14 (2025-07-08)
  • PQ.2.2 (2025-07-14)
  • PQ.1.2 (2025-07-14)
  • PQ.1.3 (2025-07-14)
  • PQ.1.4 (2025-07-14)
  • PQ.18 (2025-07-14)
  • PQ.19 (2025-07-14)
  • PQ.20 (2025-07-14)
  • PQ.21 (2025-07-14)
  • PQ.22 (2025-07-14)
  • XFG.15 (2025-07-14)
  • PQ.23 (2025-07-14)
  • PQ.9.1 (2025-07-14)
  • PQ.8.1 (2025-07-14)
  • LF.7.11 (2025-07-14)
  • PQ.24 (2025-07-14)
  • XFG.4.1 (2025-07-14)
  • QD.1 (2025-07-14)
  • XFG.9.1 (2025-07-18)
  • XFG.3.4.2 (2025-07-18)
  • XFC.1.3 (2025-07-18)
  • XFC.1.4 (2025-07-18)
  • XFC.3 (2025-07-18)
  • LF.7.9.4 (2025-07-18)
  • LF.7.9.5 (2025-07-18)
  • MC.18.1 (2025-07-18)
  • MC.18.2 (2025-07-18)
  • NY.1.1 (2025-07-18)
  • NY.1.2 (2025-07-18)
  • NY.1.2.1 (2025-07-18)
  • LP.8.1.16 (2025-07-18)
  • QE.1 (2025-07-18)
  • QF.1 (2025-07-18)
  • PQ.25 (2025-07-18)
  • NY.3.3 (2025-07-18)
  • NY.3.3.1 (2025-07-18)
  • NY.3.4 (2025-07-18)
  • NY.3.5 (2025-07-18)
  • NY.3.6 (2025-07-18)
  • NY.19 (2025-07-19)
  • XFG.14.1 (2025-07-21)
  • XFG.14.2 (2025-07-21)
  • XFG.16 (2025-07-21)
  • XFG.17 (2025-07-21)
  • XFG.18 (2025-07-21)
  • XFG.19 (2025-07-21)
  • PW.3 (2025-07-22)
  • LF.7.10.2 (2025-07-22)
  • PL.3 (2025-07-22)
  • PP.1.1 (2025-07-22)
  • PP.1.1.1 (2025-07-22)
  • NW.3 (2025-07-22)
  • NW.1.4 (2025-07-22)
  • NW.1.5 (2025-07-22)
  • NW.1.6 (2025-07-22)
  • NW.1.7 (2025-07-22)
  • XES.1 (2025-07-22)
  • XES.1.1 (2025-07-22)
  • XFC.1.5 (2025-07-22)
  • XFC.1.6 (2025-07-22)
  • XFC.1.8 (2025-07-22)
  • XFC.1.9 (2025-07-22)
  • XFN.1 (2025-07-24)
  • XFN.2 (2025-07-24)
  • PG.3.1 (2025-07-25)
  • XFG.2.1 (2025-07-25)
  • XFG.2.2 (2025-07-25)
  • XFG.3.4.3 (2025-07-25)
  • XFG.21 (2025-07-25)
  • XFG.22 (2025-07-25)
  • LF.7.12 (2025-07-28)
  • LF.7.12.1 (2025-07-28)
  • PQ.26 (2025-07-29)
  • PQ.4.1 (2025-07-29)
  • PQ.5.1 (2025-07-29)
  • PQ.5.1.1 (2025-07-29)
  • PQ.5.1.2 (2025-07-29)
  • PQ.27 (2025-07-29)
  • PQ.28 (2025-07-29)
  • XFG.3.5 (2025-07-29)
  • XFG.3.5.1 (2025-07-29)
  • XFG.3.6 (2025-07-29)
  • XFG.3.7 (2025-07-29)
  • XFG.3.1.1 (2025-07-29)
  • XFG.3.1.2 (2025-07-29)
  • XFG.3.1.3 (2025-07-29)
  • NL.23 (2025-07-29)
  • NL.5.2.1 (2025-07-29)
  • LB.1.7.4 (2025-07-29)
  • LB.1.11 (2025-07-29)
  • LB.1.11.1 (2025-07-29)
  • LB.1.11.2 (2025-07-29)
  • XFR (2025-07-29)
  • XFS (2025-07-29)
  • QG.1 (2025-07-29)
  • QH.1 (2025-07-29)
  • XFT (2025-07-29)
  • XFU (2025-07-29)
  • QC.2.1 (2025-07-29)
  • QC.2.2 (2025-07-29)
  • QC.2.3 (2025-07-29)
  • QC.4.1 (2025-07-29)
  • QC.6 (2025-07-29)
  • LF.7.6.3 (2025-07-29)
  • LF.7.6.4 (2025-07-29)
  • LF.7.6.5 (2025-07-29)
  • LF.7.1.14 (2025-07-29)
  • XFG.3.3.1 (2025-07-29)
  • XFV (2025-07-29)
  • QJ.1 (2025-07-29)
  • QJ.2 (2025-07-29)

SARS-CoV-2 (BA.2.86) (nextstrain/sars-cov-2/BA.2.86)

  • Add all 185 Pango lineages newly designated between 2025-06-09 and 2025-07-30. Unfold below to see a list of all newly included lineages with their designation dates:
Newly included lineages, with designation date in parentheses
  • PE.1.1 (2025-06-12)
  • PE.1.3 (2025-06-12)
  • PE.1.4 (2025-06-12)
  • PE.1.5 (2025-06-12)
  • MC.10.2.3 (2025-06-12)
  • XEC.27.1 (2025-06-12)
  • XEC.27.2 (2025-06-12)
  • NY.16.2 (2025-06-12)
  • XEC.23.1 (2025-06-12)
  • MC.9.3 (2025-06-12)
  • XEC.2.7 (2025-06-12)
  • XEC.2.8 (2025-06-12)
  • XEC.2.9 (2025-06-12)
  • XEC.2.10 (2025-06-12)
  • XEC.41 (2025-06-12)
  • PZ.1 (2025-06-13)
  • QA.1 (2025-06-13)
  • QA.2 (2025-06-13)
  • QA.3 (2025-06-13)
  • QA.4 (2025-06-13)
  • QA.5 (2025-06-13)
  • QA.6 (2025-06-13)
  • QA.7 (2025-06-13)
  • NT.3 (2025-06-13)
  • NT.2.1 (2025-06-13)
  • NT.4 (2025-06-13)
  • NT.5 (2025-06-13)
  • NT.6 (2025-06-13)
  • LF.7.1.12 (2025-06-13)
  • LF.7.1.13 (2025-06-13)
  • QB.1 (2025-06-13)
  • XFP.1 (2025-06-14)
  • XFG.4 (2025-06-14)
  • XFG.5 (2025-06-14)
  • XFG.6 (2025-06-14)
  • NY.18 (2025-06-14)
  • NY.18.1 (2025-06-14)
  • XDY.8 (2025-06-15)
  • XDY.9 (2025-06-15)
  • XDY.10 (2025-06-15)
  • XDY.11 (2025-06-15)
  • XDY.12 (2025-06-15)
  • XDY.12.1 (2025-06-15)
  • XDY.12.1.1 (2025-06-15)
  • XFG.7 (2025-06-16)
  • PY.1.1 (2025-06-16)
  • QC.1 (2025-06-17)
  • QC.2 (2025-06-17)
  • QC.3 (2025-06-17)
  • QC.4 (2025-06-17)
  • QC.5 (2025-06-19)
  • PQ.17 (2025-06-28)
  • PQ.10.1 (2025-06-28)
  • PQ.2.1 (2025-06-28)
  • PQ.13.1 (2025-06-28)
  • PY.4.1 (2025-07-02)
  • PY.1.1.1 (2025-07-02)
  • PY.1.2 (2025-07-03)
  • PY.1.3 (2025-07-03)
  • PY.1.4 (2025-07-03)
  • PY.1.4.1 (2025-07-03)
  • XFP.2 (2025-07-08)
  • XFP.1.1 (2025-07-08)
  • XFG.8 (2025-07-08)
  • XFG.9 (2025-07-08)
  • XFG.10 (2025-07-08)
  • XFQ (2025-07-08)
  • XFG.11 (2025-07-08)
  • XFG.12 (2025-07-08)
  • XFG.13 (2025-07-08)
  • XFG.3.2 (2025-07-08)
  • XFG.3.3 (2025-07-08)
  • XFG.3.4 (2025-07-08)
  • XFG.3.4.1 (2025-07-08)
  • XFG.14 (2025-07-08)
  • PQ.2.2 (2025-07-14)
  • PQ.1.2 (2025-07-14)
  • PQ.1.3 (2025-07-14)
  • PQ.1.4 (2025-07-14)
  • PQ.18 (2025-07-14)
  • PQ.19 (2025-07-14)
  • PQ.20 (2025-07-14)
  • PQ.21 (2025-07-14)
  • PQ.22 (2025-07-14)
  • XFG.15 (2025-07-14)
  • PQ.23 (2025-07-14)
  • PQ.9.1 (2025-07-14)
  • PQ.8.1 (2025-07-14)
  • LF.7.11 (2025-07-14)
  • PQ.24 (2025-07-14)
  • XFG.4.1 (2025-07-14)
  • QD.1 (2025-07-14)
  • XFG.9.1 (2025-07-18)
  • XFG.3.4.2 (2025-07-18)
  • XFC.1.3 (2025-07-18)
  • XFC.1.4 (2025-07-18)
  • XFC.3 (2025-07-18)
  • LF.7.9.4 (2025-07-18)
  • LF.7.9.5 (2025-07-18)
  • MC.18.1 (2025-07-18)
  • MC.18.2 (2025-07-18)
  • NY.1.1 (2025-07-18)
  • NY.1.2 (2025-07-18)
  • NY.1.2.1 (2025-07-18)
  • LP.8.1.16 (2025-07-18)
  • QE.1 (2025-07-18)
  • QF.1 (2025-07-18)
  • PQ.25 (2025-07-18)
  • NY.3.3 (2025-07-18)
  • NY.3.3.1 (2025-07-18)
  • NY.3.4 (2025-07-18)
  • NY.3.5 (2025-07-18)
  • NY.3.6 (2025-07-18)
  • NY.19 (2025-07-19)
  • XFG.14.1 (2025-07-21)
  • XFG.14.2 (2025-07-21)
  • XFG.16 (2025-07-21)
  • XFG.17 (2025-07-21)
  • XFG.18 (2025-07-21)
  • XFG.19 (2025-07-21)
  • PW.3 (2025-07-22)
  • LF.7.10.2 (2025-07-22)
  • PL.3 (2025-07-22)
  • PP.1.1 (2025-07-22)
  • PP.1.1.1 (2025-07-22)
  • NW.3 (2025-07-22)
  • NW.1.4 (2025-07-22)
  • NW.1.5 (2025-07-22)
  • NW.1.6 (2025-07-22)
  • NW.1.7 (2025-07-22)
  • XES.1 (2025-07-22)
  • XES.1.1 (2025-07-22)
  • XFC.1.5 (2025-07-22)
  • XFC.1.6 (2025-07-22)
  • XFC.1.8 (2025-07-22)
  • XFC.1.9 (2025-07-22)
  • XFN.1 (2025-07-24)
  • XFN.2 (2025-07-24)
  • PG.3.1 (2025-07-25)
  • XFG.2.1 (2025-07-25)
  • XFG.2.2 (2025-07-25)
  • XFG.3.4.3 (2025-07-25)
  • XFG.21 (2025-07-25)
  • XFG.22 (2025-07-25)
  • LF.7.12 (2025-07-28)
  • LF.7.12.1 (2025-07-28)
  • PQ.26 (2025-07-29)
  • PQ.4.1 (2025-07-29)
  • PQ.5.1 (2025-07-29)
  • PQ.5.1.1 (2025-07-29)
  • PQ.5.1.2 (2025-07-29)
  • PQ.27 (2025-07-29)
  • PQ.28 (2025-07-29)
  • XFG.3.5 (2025-07-29)
  • XFG.3.5.1 (2025-07-29)
  • XFG.3.6 (2025-07-29)
  • XFG.3.7 (2025-07-29)
  • XFG.3.1.1 (2025-07-29)
  • XFG.3.1.2 (2025-07-29)
  • XFG.3.1.3 (2025-07-29)
  • NL.23 (2025-07-29)
  • NL.5.2.1 (2025-07-29)
  • LB.1.7.4 (2025-07-29)
  • LB.1.11 (2025-07-29)
  • LB.1.11.1 (2025-07-29)
  • LB.1.11.2 (2025-07-29)
  • XFR (2025-07-29)
  • XFS (2025-07-29)
  • QG.1 (2025-07-29)
  • QH.1 (2025-07-29)
  • XFT (2025-07-29)
  • XFU (2025-07-29)
  • QC.2.1 (2025-07-29)
  • QC.2.2 (2025-07-29)
  • QC.2.3 (2025-07-29)
  • QC.4.1 (2025-07-29)
  • QC.6 (2025-07-29)
  • LF.7.6.3 (2025-07-29)
  • LF.7.6.4 (2025-07-29)
  • LF.7.6.5 (2025-07-29)
  • LF.7.1.14 (2025-07-29)
  • XFG.3.3.1 (2025-07-29)
  • XFV (2025-07-29)
  • QJ.1 (2025-07-29)
  • QJ.2 (2025-07-29)

Measles N450 (WHO-2012) (nextstrain/measles/N450/WHO-2012)

Fix schemaVersion field in pathogen.json.

This is a technical change. Data is unchanged.

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