github nextstrain/nextclade_data 2025-03-26--11-47-13Z

latest releases: 2025-04-02--19-11-08Z, 2025-04-01--08-20-12Z, 2025-03-26--14-04-54Z...
7 days ago

This release contains changes for datasets:

  • SARS-CoV-2 (nextstrain/sars-cov-2/wuhan-hu-1/orfs)
  • SARS-CoV-2 (Mature proteins) (nextstrain/sars-cov-2/wuhan-hu-1/proteins)
  • SARS-CoV-2 (BA.2) (nextstrain/sars-cov-2/BA.2)
  • SARS-CoV-2 (XBB) (nextstrain/sars-cov-2/XBB)
  • SARS-CoV-2 (BA.2.86) (nextstrain/sars-cov-2/BA.2.86)
  • Influenza A H1N1pdm NA (nextstrain/flu/h1n1pdm/na/MW626056)
  • Influenza B Victoria NA (nextstrain/flu/vic/na/CY073894)
  • Mpox virus (Clade I) (nextstrain/mpox/clade-i)
  • Measles N450 (WHO-2012) (nextstrain/measles/N450/WHO-2012)
  • Yellow fever virus (YFV) prM-E region (nextstrain/yellow-fever/prM-E)
  • PRRSV-1 (community/isuvdl/mazeller/prrsv1/orf5/yimim2025)
  • PRRSV-2 ORF5 Lineages, Yim-im & Zhang 2023 Microbiol Spectr (community/isuvdl/mazeller/prrsv2/orf5/yimim2023)
  • DENV-1 (community/v-gen-lab/dengue/denv1)
  • DENV-2 (community/v-gen-lab/dengue/denv2)
  • DENV-3 (community/v-gen-lab/dengue/denv3)
  • DENV-4 (community/v-gen-lab/dengue/denv4)
  • Orthomarburgvirus marburgense (community/genspectrum/marburg/HK1980/all-lineages)

SARS-CoV-2 (nextstrain/sars-cov-2/wuhan-hu-1/orfs)

Fix GFF3 format issues in genome annotation

SARS-CoV-2 (Mature proteins) (nextstrain/sars-cov-2/wuhan-hu-1/proteins)

Fix GFF3 format issues in genome annotation

SARS-CoV-2 (BA.2) (nextstrain/sars-cov-2/BA.2)

Fix GFF3 format issues in genome annotation

SARS-CoV-2 (XBB) (nextstrain/sars-cov-2/XBB)

Fix GFF3 format issues in genome annotation

SARS-CoV-2 (BA.2.86) (nextstrain/sars-cov-2/BA.2.86)

Fix GFF3 format issues in genome annotation

Influenza A H1N1pdm NA (nextstrain/flu/h1n1pdm/na/MW626056)

Fix GFF3 format issues in genome annotation

Influenza B Victoria NA (nextstrain/flu/vic/na/CY073894)

Fix GFF3 format issues in genome annotation

Mpox virus (Clade I) (nextstrain/mpox/clade-i)

Fix GFF3 format issues in genome annotation

Measles N450 (WHO-2012) (nextstrain/measles/N450/WHO-2012)

Fix GFF3 format issues in genome annotation

Yellow fever virus (YFV) prM-E region (nextstrain/yellow-fever/prM-E)

Fix GFF3 format issues in genome annotation

PRRSV-1 (community/isuvdl/mazeller/prrsv1/orf5/yimim2025)

Fix GFF3 format issues in genome annotation

PRRSV-2 ORF5 Lineages, Yim-im & Zhang 2023 Microbiol Spectr (community/isuvdl/mazeller/prrsv2/orf5/yimim2023)

Fix GFF3 format issues in genome annotation

DENV-1 (community/v-gen-lab/dengue/denv1)

Fix GFF3 format issues in genome annotation

DENV-2 (community/v-gen-lab/dengue/denv2)

Fix GFF3 format issues in genome annotation

DENV-3 (community/v-gen-lab/dengue/denv3)

Fix GFF3 format issues in genome annotation

DENV-4 (community/v-gen-lab/dengue/denv4)

Fix GFF3 format issues in genome annotation

Orthomarburgvirus marburgense (community/genspectrum/marburg/HK1980/all-lineages)

Fix GFF3 format issues in genome annotation

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