github nextstrain/nextclade_data 2025-01-28--16-39-09Z
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one day ago

This release contains changes for datasets:

  • SARS-CoV-2 (nextstrain/sars-cov-2/wuhan-hu-1/orfs)
  • SARS-CoV-2 (Mature proteins) (nextstrain/sars-cov-2/wuhan-hu-1/proteins)
  • SARS-CoV-2 (BA.2) (nextstrain/sars-cov-2/BA.2)
  • SARS-CoV-2 (XBB) (nextstrain/sars-cov-2/XBB)
  • SARS-CoV-2 (BA.2.86) (nextstrain/sars-cov-2/BA.2.86)

SARS-CoV-2 (nextstrain/sars-cov-2/wuhan-hu-1/orfs)

  • Add newly designated Nextstrain clade 25A (LP.8.1)
  • Add all 78 Pango lineages newly designated between 2024-11-14 and 2025-01-27. Unfold below to see a list of all newly included lineages with their designation dates:
Newly included lineages, with designation date in parentheses
  • XEK.1 (2024-12-10)
  • XEK.1.1 (2024-12-10)
  • XEK.2 (2024-12-10)
  • XEK.3 (2024-12-10)
  • XEQ (2024-12-10)
  • LP.11 (2024-12-10)
  • LP.8.2.1 (2024-12-10)
  • LP.8.1.1 (2024-12-10)
  • XEC.8 (2024-12-10)
  • XEC.9 (2024-12-10)
  • XEC.10 (2024-12-10)
  • XEC.11 (2024-12-10)
  • XEC.2.1 (2024-12-10)
  • XEC.2.2 (2024-12-10)
  • XEC.2.3 (2024-12-10)
  • XEC.2.3.1 (2024-12-10)
  • XEC.12 (2024-12-10)
  • LF.7.3.1 (2024-12-10)
  • MV.1.1 (2024-12-10)
  • MU.2.1.1 (2024-12-10)
  • MU.1.1 (2024-12-10)
  • MU.4 (2024-12-10)
  • MU.5 (2024-12-10)
  • MC.23 (2024-12-10)
  • XEC.13 (2024-12-11)
  • MC.24 (2024-12-11)
  • MC.25 (2024-12-11)
  • MC.26 (2024-12-11)
  • MC.26.1 (2024-12-11)
  • MC.27 (2024-12-11)
  • MC.28 (2024-12-11)
  • MC.28.1 (2024-12-11)
  • MC.1.2 (2024-12-11)
  • XEC.14 (2024-12-11)
  • MC.13.3 (2024-12-11)
  • LB.1.3.4 (2024-12-11)
  • LP.10.1.1 (2024-12-18)
  • KP.2.3.14 (2024-12-18)
  • JN.1.68.1 (2024-12-18)
  • LP.8.1.2 (2024-12-18)
  • KP.3.1.11 (2024-12-18)
  • KP.3.1.12 (2024-12-18)
  • NR.1 (2024-12-18)
  • NS.1 (2024-12-18)
  • NS.1.1 (2024-12-18)
  • NS.1.2 (2024-12-18)
  • NS.2 (2024-12-18)
  • MT.1.1 (2024-12-18)
  • NF.1.1 (2024-12-18)
  • NS.3 (2024-12-18)
  • ND.2.1 (2024-12-18)
  • ND.1.1.1 (2024-12-18)
  • ND.1.1.2 (2024-12-18)
  • XEJ.1 (2024-12-18)
  • XEJ.2 (2024-12-18)
  • XEJ.3 (2024-12-18)
  • XEK.4 (2024-12-18)
  • NT.1 (2024-12-18)
  • LF.7.5 (2024-12-18)
  • XEC.15 (2024-12-18)
  • KS.2 (2024-12-18)
  • XER (2024-12-18)
  • XEC.16 (2024-12-18)
  • NU.1 (2024-12-18)
  • XES (2024-12-18)
  • MC.1.3 (2024-12-18)
  • MC.1.3.1 (2024-12-18)
  • KP.2.3.15 (2024-12-18)
  • KP.2.6.2 (2024-12-18)
  • KP.2.6.3 (2024-12-18)
  • NB.1.1 (2024-12-18)
  • LF.7.6 (2024-12-18)
  • LF.7.6.1 (2024-12-18)
  • MC.19.1 (2024-12-19)
  • KP.3.3.5 (2024-12-20)
  • NV.1 (2024-12-20)
  • XET (2024-12-20)
  • XEU (2024-12-20)

SARS-CoV-2 (Mature proteins) (nextstrain/sars-cov-2/wuhan-hu-1/proteins)

  • Add newly designated Nextstrain clade 25A (LP.8.1)
  • Add all 78 Pango lineages newly designated between 2024-11-14 and 2025-01-27. Unfold below to see a list of all newly included lineages with their designation dates:
Newly included lineages, with designation date in parentheses
  • XEK.1 (2024-12-10)
  • XEK.1.1 (2024-12-10)
  • XEK.2 (2024-12-10)
  • XEK.3 (2024-12-10)
  • XEQ (2024-12-10)
  • LP.11 (2024-12-10)
  • LP.8.2.1 (2024-12-10)
  • LP.8.1.1 (2024-12-10)
  • XEC.8 (2024-12-10)
  • XEC.9 (2024-12-10)
  • XEC.10 (2024-12-10)
  • XEC.11 (2024-12-10)
  • XEC.2.1 (2024-12-10)
  • XEC.2.2 (2024-12-10)
  • XEC.2.3 (2024-12-10)
  • XEC.2.3.1 (2024-12-10)
  • XEC.12 (2024-12-10)
  • LF.7.3.1 (2024-12-10)
  • MV.1.1 (2024-12-10)
  • MU.2.1.1 (2024-12-10)
  • MU.1.1 (2024-12-10)
  • MU.4 (2024-12-10)
  • MU.5 (2024-12-10)
  • MC.23 (2024-12-10)
  • XEC.13 (2024-12-11)
  • MC.24 (2024-12-11)
  • MC.25 (2024-12-11)
  • MC.26 (2024-12-11)
  • MC.26.1 (2024-12-11)
  • MC.27 (2024-12-11)
  • MC.28 (2024-12-11)
  • MC.28.1 (2024-12-11)
  • MC.1.2 (2024-12-11)
  • XEC.14 (2024-12-11)
  • MC.13.3 (2024-12-11)
  • LB.1.3.4 (2024-12-11)
  • LP.10.1.1 (2024-12-18)
  • KP.2.3.14 (2024-12-18)
  • JN.1.68.1 (2024-12-18)
  • LP.8.1.2 (2024-12-18)
  • KP.3.1.11 (2024-12-18)
  • KP.3.1.12 (2024-12-18)
  • NR.1 (2024-12-18)
  • NS.1 (2024-12-18)
  • NS.1.1 (2024-12-18)
  • NS.1.2 (2024-12-18)
  • NS.2 (2024-12-18)
  • MT.1.1 (2024-12-18)
  • NF.1.1 (2024-12-18)
  • NS.3 (2024-12-18)
  • ND.2.1 (2024-12-18)
  • ND.1.1.1 (2024-12-18)
  • ND.1.1.2 (2024-12-18)
  • XEJ.1 (2024-12-18)
  • XEJ.2 (2024-12-18)
  • XEJ.3 (2024-12-18)
  • XEK.4 (2024-12-18)
  • NT.1 (2024-12-18)
  • LF.7.5 (2024-12-18)
  • XEC.15 (2024-12-18)
  • KS.2 (2024-12-18)
  • XER (2024-12-18)
  • XEC.16 (2024-12-18)
  • NU.1 (2024-12-18)
  • XES (2024-12-18)
  • MC.1.3 (2024-12-18)
  • MC.1.3.1 (2024-12-18)
  • KP.2.3.15 (2024-12-18)
  • KP.2.6.2 (2024-12-18)
  • KP.2.6.3 (2024-12-18)
  • NB.1.1 (2024-12-18)
  • LF.7.6 (2024-12-18)
  • LF.7.6.1 (2024-12-18)
  • MC.19.1 (2024-12-19)
  • KP.3.3.5 (2024-12-20)
  • NV.1 (2024-12-20)
  • XET (2024-12-20)
  • XEU (2024-12-20)

SARS-CoV-2 (BA.2) (nextstrain/sars-cov-2/BA.2)

  • Add newly designated Nextstrain clade 25A (LP.8.1)
  • Add all 78 Pango lineages newly designated between 2024-11-14 and 2025-01-27. Unfold below to see a list of all newly included lineages with their designation dates:
Newly included lineages, with designation date in parentheses
  • XEK.1 (2024-12-10)
  • XEK.1.1 (2024-12-10)
  • XEK.2 (2024-12-10)
  • XEK.3 (2024-12-10)
  • XEQ (2024-12-10)
  • LP.11 (2024-12-10)
  • LP.8.2.1 (2024-12-10)
  • LP.8.1.1 (2024-12-10)
  • XEC.8 (2024-12-10)
  • XEC.9 (2024-12-10)
  • XEC.10 (2024-12-10)
  • XEC.11 (2024-12-10)
  • XEC.2.1 (2024-12-10)
  • XEC.2.2 (2024-12-10)
  • XEC.2.3 (2024-12-10)
  • XEC.2.3.1 (2024-12-10)
  • XEC.12 (2024-12-10)
  • LF.7.3.1 (2024-12-10)
  • MV.1.1 (2024-12-10)
  • MU.2.1.1 (2024-12-10)
  • MU.1.1 (2024-12-10)
  • MU.4 (2024-12-10)
  • MU.5 (2024-12-10)
  • MC.23 (2024-12-10)
  • XEC.13 (2024-12-11)
  • MC.24 (2024-12-11)
  • MC.25 (2024-12-11)
  • MC.26 (2024-12-11)
  • MC.26.1 (2024-12-11)
  • MC.27 (2024-12-11)
  • MC.28 (2024-12-11)
  • MC.28.1 (2024-12-11)
  • MC.1.2 (2024-12-11)
  • XEC.14 (2024-12-11)
  • MC.13.3 (2024-12-11)
  • LB.1.3.4 (2024-12-11)
  • LP.10.1.1 (2024-12-18)
  • KP.2.3.14 (2024-12-18)
  • JN.1.68.1 (2024-12-18)
  • LP.8.1.2 (2024-12-18)
  • KP.3.1.11 (2024-12-18)
  • KP.3.1.12 (2024-12-18)
  • NR.1 (2024-12-18)
  • NS.1 (2024-12-18)
  • NS.1.1 (2024-12-18)
  • NS.1.2 (2024-12-18)
  • NS.2 (2024-12-18)
  • MT.1.1 (2024-12-18)
  • NF.1.1 (2024-12-18)
  • NS.3 (2024-12-18)
  • ND.2.1 (2024-12-18)
  • ND.1.1.1 (2024-12-18)
  • ND.1.1.2 (2024-12-18)
  • XEJ.1 (2024-12-18)
  • XEJ.2 (2024-12-18)
  • XEJ.3 (2024-12-18)
  • XEK.4 (2024-12-18)
  • NT.1 (2024-12-18)
  • LF.7.5 (2024-12-18)
  • XEC.15 (2024-12-18)
  • KS.2 (2024-12-18)
  • XER (2024-12-18)
  • XEC.16 (2024-12-18)
  • NU.1 (2024-12-18)
  • XES (2024-12-18)
  • MC.1.3 (2024-12-18)
  • MC.1.3.1 (2024-12-18)
  • KP.2.3.15 (2024-12-18)
  • KP.2.6.2 (2024-12-18)
  • KP.2.6.3 (2024-12-18)
  • NB.1.1 (2024-12-18)
  • LF.7.6 (2024-12-18)
  • LF.7.6.1 (2024-12-18)
  • MC.19.1 (2024-12-19)
  • KP.3.3.5 (2024-12-20)
  • NV.1 (2024-12-20)
  • XET (2024-12-20)
  • XEU (2024-12-20)

SARS-CoV-2 (XBB) (nextstrain/sars-cov-2/XBB)

  • Add newly designated Nextstrain clade 25A (LP.8.1)
  • Add all 78 Pango lineages newly designated between 2024-11-14 and 2025-01-27. Unfold below to see a list of all newly included lineages with their designation dates:
Newly included lineages, with designation date in parentheses
  • XEK.1 (2024-12-10)
  • XEK.1.1 (2024-12-10)
  • XEK.2 (2024-12-10)
  • XEK.3 (2024-12-10)
  • XEQ (2024-12-10)
  • LP.11 (2024-12-10)
  • LP.8.2.1 (2024-12-10)
  • LP.8.1.1 (2024-12-10)
  • XEC.8 (2024-12-10)
  • XEC.9 (2024-12-10)
  • XEC.10 (2024-12-10)
  • XEC.11 (2024-12-10)
  • XEC.2.1 (2024-12-10)
  • XEC.2.2 (2024-12-10)
  • XEC.2.3 (2024-12-10)
  • XEC.2.3.1 (2024-12-10)
  • XEC.12 (2024-12-10)
  • LF.7.3.1 (2024-12-10)
  • MV.1.1 (2024-12-10)
  • MU.2.1.1 (2024-12-10)
  • MU.1.1 (2024-12-10)
  • MU.4 (2024-12-10)
  • MU.5 (2024-12-10)
  • MC.23 (2024-12-10)
  • XEC.13 (2024-12-11)
  • MC.24 (2024-12-11)
  • MC.25 (2024-12-11)
  • MC.26 (2024-12-11)
  • MC.26.1 (2024-12-11)
  • MC.27 (2024-12-11)
  • MC.28 (2024-12-11)
  • MC.28.1 (2024-12-11)
  • MC.1.2 (2024-12-11)
  • XEC.14 (2024-12-11)
  • MC.13.3 (2024-12-11)
  • LB.1.3.4 (2024-12-11)
  • LP.10.1.1 (2024-12-18)
  • KP.2.3.14 (2024-12-18)
  • JN.1.68.1 (2024-12-18)
  • LP.8.1.2 (2024-12-18)
  • KP.3.1.11 (2024-12-18)
  • KP.3.1.12 (2024-12-18)
  • NR.1 (2024-12-18)
  • NS.1 (2024-12-18)
  • NS.1.1 (2024-12-18)
  • NS.1.2 (2024-12-18)
  • NS.2 (2024-12-18)
  • MT.1.1 (2024-12-18)
  • NF.1.1 (2024-12-18)
  • NS.3 (2024-12-18)
  • ND.2.1 (2024-12-18)
  • ND.1.1.1 (2024-12-18)
  • ND.1.1.2 (2024-12-18)
  • XEJ.1 (2024-12-18)
  • XEJ.2 (2024-12-18)
  • XEJ.3 (2024-12-18)
  • XEK.4 (2024-12-18)
  • NT.1 (2024-12-18)
  • LF.7.5 (2024-12-18)
  • XEC.15 (2024-12-18)
  • KS.2 (2024-12-18)
  • XER (2024-12-18)
  • XEC.16 (2024-12-18)
  • NU.1 (2024-12-18)
  • XES (2024-12-18)
  • MC.1.3 (2024-12-18)
  • MC.1.3.1 (2024-12-18)
  • KP.2.3.15 (2024-12-18)
  • KP.2.6.2 (2024-12-18)
  • KP.2.6.3 (2024-12-18)
  • NB.1.1 (2024-12-18)
  • LF.7.6 (2024-12-18)
  • LF.7.6.1 (2024-12-18)
  • MC.19.1 (2024-12-19)
  • KP.3.3.5 (2024-12-20)
  • NV.1 (2024-12-20)
  • XET (2024-12-20)
  • XEU (2024-12-20)

SARS-CoV-2 (BA.2.86) (nextstrain/sars-cov-2/BA.2.86)

  • Add newly designated Nextstrain clade 25A (LP.8.1)
  • Add all 78 Pango lineages newly designated between 2024-11-14 and 2025-01-27. Unfold below to see a list of all newly included lineages with their designation dates:
Newly included lineages, with designation date in parentheses
  • XEK.1 (2024-12-10)
  • XEK.1.1 (2024-12-10)
  • XEK.2 (2024-12-10)
  • XEK.3 (2024-12-10)
  • XEQ (2024-12-10)
  • LP.11 (2024-12-10)
  • LP.8.2.1 (2024-12-10)
  • LP.8.1.1 (2024-12-10)
  • XEC.8 (2024-12-10)
  • XEC.9 (2024-12-10)
  • XEC.10 (2024-12-10)
  • XEC.11 (2024-12-10)
  • XEC.2.1 (2024-12-10)
  • XEC.2.2 (2024-12-10)
  • XEC.2.3 (2024-12-10)
  • XEC.2.3.1 (2024-12-10)
  • XEC.12 (2024-12-10)
  • LF.7.3.1 (2024-12-10)
  • MV.1.1 (2024-12-10)
  • MU.2.1.1 (2024-12-10)
  • MU.1.1 (2024-12-10)
  • MU.4 (2024-12-10)
  • MU.5 (2024-12-10)
  • MC.23 (2024-12-10)
  • XEC.13 (2024-12-11)
  • MC.24 (2024-12-11)
  • MC.25 (2024-12-11)
  • MC.26 (2024-12-11)
  • MC.26.1 (2024-12-11)
  • MC.27 (2024-12-11)
  • MC.28 (2024-12-11)
  • MC.28.1 (2024-12-11)
  • MC.1.2 (2024-12-11)
  • XEC.14 (2024-12-11)
  • MC.13.3 (2024-12-11)
  • LB.1.3.4 (2024-12-11)
  • LP.10.1.1 (2024-12-18)
  • KP.2.3.14 (2024-12-18)
  • JN.1.68.1 (2024-12-18)
  • LP.8.1.2 (2024-12-18)
  • KP.3.1.11 (2024-12-18)
  • KP.3.1.12 (2024-12-18)
  • NR.1 (2024-12-18)
  • NS.1 (2024-12-18)
  • NS.1.1 (2024-12-18)
  • NS.1.2 (2024-12-18)
  • NS.2 (2024-12-18)
  • MT.1.1 (2024-12-18)
  • NF.1.1 (2024-12-18)
  • NS.3 (2024-12-18)
  • ND.2.1 (2024-12-18)
  • ND.1.1.1 (2024-12-18)
  • ND.1.1.2 (2024-12-18)
  • XEJ.1 (2024-12-18)
  • XEJ.2 (2024-12-18)
  • XEJ.3 (2024-12-18)
  • XEK.4 (2024-12-18)
  • NT.1 (2024-12-18)
  • LF.7.5 (2024-12-18)
  • XEC.15 (2024-12-18)
  • KS.2 (2024-12-18)
  • XER (2024-12-18)
  • XEC.16 (2024-12-18)
  • NU.1 (2024-12-18)
  • XES (2024-12-18)
  • MC.1.3 (2024-12-18)
  • MC.1.3.1 (2024-12-18)
  • KP.2.3.15 (2024-12-18)
  • KP.2.6.2 (2024-12-18)
  • KP.2.6.3 (2024-12-18)
  • NB.1.1 (2024-12-18)
  • LF.7.6 (2024-12-18)
  • LF.7.6.1 (2024-12-18)
  • MC.19.1 (2024-12-19)
  • KP.3.3.5 (2024-12-20)
  • NV.1 (2024-12-20)
  • XET (2024-12-20)
  • XEU (2024-12-20)
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