This release contains changes for datasets:
- Influenza A H1N1pdm HA (nextstrain/flu/h1n1pdm/ha/CY121680)
- Influenza A H1N1pdm HA (nextstrain/flu/h1n1pdm/ha/MW626062)
- Influenza A H1N1pdm NA (nextstrain/flu/h1n1pdm/na/MW626056)
- Influenza A H3N2 HA (nextstrain/flu/h3n2/ha/CY163680)
- Influenza A H3N2 HA (nextstrain/flu/h3n2/ha/EPI1857216)
- Influenza A H3N2 NA (nextstrain/flu/h3n2/na/EPI1857215)
- Influenza B Victoria HA (nextstrain/flu/vic/ha/KX058884)
- Influenza B Victoria NA (nextstrain/flu/vic/na/CY073894)
- Mpox virus (All clades) (nextstrain/mpox/all-clades)
- Mpox virus (Clade IIb) (nextstrain/mpox/clade-iib)
- Mpox virus (Lineage B.1) (nextstrain/mpox/lineage-b.1)
Influenza A H1N1pdm HA (nextstrain/flu/h1n1pdm/ha/CY121680)
- aliasing of C.1.1.1 as D
- addition of subclades D.1 - D.4: D.1, D.2, D.3, D.4
- addition of subclades C.1.8 and C.1.9
- addition of subclades C.1.7.1 and C.1.7.2
Influenza A H1N1pdm HA (nextstrain/flu/h1n1pdm/ha/MW626062)
- aliasing of C.1.1.1 as D
- addition of subclades D.1 - D.4: D.1, D.2, D.3, D.4
- addition of subclades C.1.8 and C.1.9
- addition of subclades C.1.7.1 and C.1.7.2
Influenza A H1N1pdm NA (nextstrain/flu/h1n1pdm/na/MW626056)
- addition of subclade C.5.3.1
- addition of subclade C.5.3.2
- addition of subclade C.5.3.3
- adjustment of definition of C.5.3
Influenza A H3N2 HA (nextstrain/flu/h3n2/ha/CY163680)
Update of the datasets with more recent data. No new clades were added on this occasion.
Influenza A H3N2 HA (nextstrain/flu/h3n2/ha/EPI1857216)
Update of the datasets with more recent data. No new clades were added on this occasion.
Influenza A H3N2 NA (nextstrain/flu/h3n2/na/EPI1857215)
Influenza B Victoria HA (nextstrain/flu/vic/ha/KX058884)
Update of the datasets with more recent data. No new clades were added on this occasion.
Influenza B Victoria NA (nextstrain/flu/vic/na/CY073894)
- revision of definitions of B.7.2 and B.7.3
- addition of subclade B.7.4
Mpox virus (All clades) (nextstrain/mpox/all-clades)
- New hMPXV-1 lineages B.1.21, B.1.22, and C.1.1 are now included in the dataset. For more information on these lineages, see the hMPXV-1 lineage definitions PR
- The sequences used in the reference trees have been updated to include the latest sequences available in Genbank as of 2024-04-16
Mpox virus (Clade IIb) (nextstrain/mpox/clade-iib)
- New hMPXV-1 lineages B.1.21, B.1.22, and C.1.1 are now included in the dataset. For more information on these lineages, see the hMPXV-1 lineage definitions PR
- The sequences used in the reference trees have been updated to include the latest sequences available in Genbank as of 2024-04-16
Mpox virus (Lineage B.1) (nextstrain/mpox/lineage-b.1)
- New hMPXV-1 lineages B.1.21, B.1.22, and C.1.1 are now included in the dataset. For more information on these lineages, see the hMPXV-1 lineage definitions PR
- The sequences used in the reference trees have been updated to include the latest sequences available in Genbank as of 2024-04-16