github nextstrain/nextclade_data 2022-12-09--19-04-42--UTC
2022-12-07

Influenza datasets

New dataset version (tag 2022-12-07T08:35:53Z)

A/H3N2: Update and addition of new reference sequence A/Darwin/6/2021

The existing dataset with reference sequence A/Wisconsin/67/2005 (CY163680) was updated to reflect recently circulating viruses.
A new dataset with reference sequence A/Darwin/6/2021 (EPI1857216), the current vaccine strain, was added.
In this latter data set, sequences are aligned to A/Darwin/6/2021 and mutations are called relative to this reference sequence.
This additional data set allows the more direct identification of changes relative to the vaccine virus.

A/H1N1dpm: Update and addition of new reference sequence A/Wisconsin/588/2019

The existing dataset with reference sequence A/California/07/2009 (CY121680) was updated to reflect recently circulating viruses.
A new dataset with reference sequence A/Wisconsin/599/2019 (MW626062), the current vaccine strain, was added.
In this latter data set, sequences are aligned to A/Wisconsin/599/2019 and mutations are called relative to this reference sequence.
This additional data set allows the more direct identification of changes relative to the vaccine virus.

B/Vic: Update

The existing dataset with reference sequence B/Brisbane/60/2008 (KX058884) was updated to reflect recently circulating viruses.

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