• Add automatic resource labels for any executor (#7528) [1d7b665]
• Add Azure Compute Gallery image and verification options (#7338) [77c9152]
• Add codespell CI check and fix existing typos (#7594) [61eaa29]
• Add configurable timeouts to SCM API requests (#7536) [7cf8eff]
• Add deep links to migration notes (#7624) [5fa4ed2]
• Add directory option to resolve report paths against outputDir (#7553) [97e0059]
• Add extension points for task caching and object-storage access (#7638) [631ed97]
• Add manifest.diagram config option (#7578) [526e01c]
• Adopt shared io.seqera:lib-util-net ProxyConfig for egress proxy handling (#7587) [8b07422]
• Align nf-agent test Groovy dependency to 4.0.33 (#7559) [53203eb]
• Change default k8s compute resource type to Job (#7524) [2aad02f]
• Clean local task dirs in hybrid runs (#7611) [cf511fd]
• Clean up ADR prose: unslop, fix typos (#7595) [cfc36f5]
• Clean up the 26.08.0-edge changelog (#7527) [2e13110]
• Deduplicate include URI resolution logic (#7644) [85eafd3]
• Deprecate storeDir and document alternative approach (#7574) [bee5c6c]
• Direct execution of named workflows (#7379) [c0c80e7]
• Do not submit queued tasks after the session has aborted (#7482) [6b6c400]
• Document multiple architectures in the arch directive (#7622) [f1c2b63]
• Fix cloning of typed process outputs to also clone topics (#7556) [b89115a]
• Fix description for process config options with method overloads (#7442) [220f607]
• Fix env config scope not applied with Google Batch (#7609) [622d290]
• Fix false warning for executor selectors (#7555) [86251c2]
• Fix formatting of legacy type annotations (#7525) [d375c23]
• Fix Google Batch storing symlinked task outputs as gcsfuse placeholders (#7612) [c63383c]
• Fix jackson, netty and grpc CVEs via api-scoped dependency constraints (#7329) [7ea2029]
• Fix lineage checksum computed in standard mode regardless of label (#7582) [2c68fa1]
• Fix local executor resource accounting race (#7652) [6a549fe]
• Fix multi-revision test failing locally (#7541) [e6c5117]
• Fix nextflow clean aborting on GCS pseudo-directories (#7630) [9e269a7]
• Fix nf-azure plugin tier-1 bugs (#6831) [640ddc3]
• Fix output index file write to object storage (#7635) [0c671cb]
• Fix resume config breaking other CLI commands (#7581) [4954632]
• Fix S3 directory upload skipping symbolic links (#7515) [65741f3]
• Fix typo in error message for invalid LID path (#7593) [0b60aba]
• Fix workflow output publishing to S3 with the default path (#7518) [1df0a99]
• fix(cache): improve NFS/lock error handling in DefaultCacheStore (#6997) [5ce7628]
• fix(plugins): resolve non-core plugin dependencies from the registry (#7613) [45a4e8c]
• Improve resilience to delayed shared file system visibility (#7489) [b327a4b]
• Make eval output names stable across runs (#7575) [9e7a492]
• Make NXF_AGENT_MODE an explicit override of agent mode auto-detection (#7615) [0e78539]
• Remove support for nf-weblog (#7639) [1a3b803]
• Rename SCM HTTP client timeouts to the global NXF_HTTPCLIENT_* namespace (#7567) [2167b94]
• Report a syntax error for an invalid output or emit assignment (#7547) [00fcddc]
• Report an error for an aliased type include (#7557) [78cda27]
• Report invalid escape sequences at the exact position (#7608) [b515310]
• Retry request timeouts in the Tower and Wave HTTP clients (#7604) [c5f8805]
• Speed up submission of Google Batch array jobs (#6847) [6ec75a6]
• Workflow modules (#7342) [1d5c296]