github mims-harvard/ToolUniverse v1.5.8
Release v1.5.8

2 hours ago

What's Changed

  • Lock the bundle against the release that just shipped, not uv's cached index by @gasvn in #804
  • Add Carbon-A gene annotation as a remote tool, and its benchmark genomes by @gasvn in #805
  • Let a hosting service say where its users add a missing login by @gasvn in #806
  • Add a ToolUniverse Connect guide skill by @gasvn in #810
  • Give the short ToolUniverse Connect address in the connect guide by @gasvn in #811
  • Stop a workspace profile.yaml from turning load_tools(categories=...) into a no-op by @gasvn in #812
  • Let a caller say whether load_tools() replaces what is loaded or adds to it by @gasvn in #813
  • Add 29 model providers on the resident remote-tool standard, each held to a byte-equivalence gate by @gasvn in #809
  • Fix sign-conditioned nominal p-values in GSEA_prerank by @starvingarc in #819
  • Remove the stale devtu-remote-provider copy now that the harness one is pushed by @gasvn in #820
  • Orange Book: return patents and exclusivity instead of a download link by @CyberNativeAI in #794
  • Avoid classifying scientific token errors as authentication failures by @gasvn in #818
  • Fix: FDA label tools can select a product's route and name a label's other sections by @gasvn in #807
  • Add protein alpha and Ile/Thr beta stereochemistry checks by @gasvn in #800
  • Add pH linkage postprocessing, campaign skills and a TNF exploration blog by @gasvn in #815
  • Add offline pKAI side-chain pKa diagnostics by @gasvn in #808
  • Fix: MAGICapp_list_guidelines reaches the whole public catalogue and searches it by @gasvn in #821
  • Fix: ~300 tools returned part of a result as if it were all of it by @gasvn in #824
  • Fix: SAbDab_search_structures searches by antigen again by @gasvn in #826
  • CI regenerates the SDK before pytest, so the generated-file tests cannot fail by @gasvn in #823
  • Fix main: regenerate the 713 wrapper hashes #824 left behind by @gasvn in #828
  • Docs: the harness mistake list is 67, and that number keeps moving by @gasvn in #827
  • Add RFD4-Proteina (seven protein-design tasks) via the hosted NVIDIA NIM by @gasvn in #829
  • The provider pool reads memory per machine and costs from the manifests by @gasvn in #830
  • Hold RFD4-Proteina resident behind one MCP tool by @gasvn in #831
  • The pool measures a model where it is loaded, and a prewarm loads it by @gasvn in #832
  • The provider counts in the pool's docs are the ones a reader can reproduce by @gasvn in #833
  • Hold BioEmu-2 resident behind one MCP tool by @gasvn in #834
  • Install the packages that exist on the runner we are given by @gasvn in #837
  • Every LOVD call fails on a parameter the caller never sent by @gasvn in #840
  • Make the weekly sweep and the wheel smoke test say what is actually wrong by @gasvn in #839
  • Release tooluniverse 1.5.8 by @gasvn in #838

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Full Changelog: v1.5.7...v1.5.8

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