github google-deepmind/alphagenome v0.3.0

one day ago

Added

  • Add get_gene_intervals to retrieve multiple gene intervals.
  • Implement __getitem__ on TrackData to generalize filter/slice methods.
  • Add normalize_variant function to normalize variants with the underlying
    assembly.
  • Add missing "Assay title", "data_source" and "biosample" columns to splice
    junction metadata.
  • Add splice junction section to API docs.

Changed

  • Update quick start notebook to not use shorter, less performant sequence
    lengths.
  • Update documentation on ChIP-TF and Histone units.
  • Move some protocol buffer conversion functions from data to models
    directory.
  • Include link in README license section to API terms.

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