dnanexus/dxCompiler 2.10.4

dxCompiler 2.10.4

on GitHub

• CWL: fixed target tool id when overriding docker requirement. File ID of an image provided in DockerRequirement.dockerLoad
  in a CWL workflow is now correctly mapped and detected upon override.
• WDL: manifest mode correctly handles non-fully qualified file IDs (updated dxScala: api)

Dependency updates

dxApi 0.13.3

• Handling of non-fully qualified file IDs for bulk search/describe. Now for the files provided without the project ID,
  the describe response will be returned only for current workspace/project. If a file was cloned to other projects, they
  will be ignored. Non-fully qualified file IDs are not allowed when searching files in other projects.
• Regression tests for API calls to platform

dxCommon 0.11.4

• Fix for handling 503 error in dx CLI when API requests are throttled

dxFileAccessProtocols 0.5.5

• Dependency update

wdlTools 0.17.12

• Optional types are preserved when using outputs from the standard library functions without explicit declaration.