Bugfixes:
-
Get a message when bedtools is installed instead of crashing without any message (see #273, #278).
-
Always test if a bedgraph is tabix indexed without checking the extension (see #13 )
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Fix a bug which was happening when
operationorsummary_methodwas used on bedgraph whereas the bedgraph had some missing intervals (see #277). -
Enforcing version 15 of HiCMatrix. Version 14 had a bug concerning the application of the correction factors of cool files.