github cov-lineages/pangolin v2.1.7
pangolin v2.1.7

latest releases: v4.3.1, v4.3, v4.2...
3 years ago

Release notes

  • Minor release to include post-hoc curation of lineages P.1 and P.2 (aliases of B.1.1.28.1 and B.1.1.28.2 respectively).
  • P.1 requires presence of at 11 or more of the following mutations that occur on the basal branch
aa:orf1ab:S1188L
aa:orf1ab:K1795Q
del:11288:9
aa:S:L18F
aa:S:T20N
aa:S:P26S
aa:S:D138Y
aa:S:R190S
aa:S:K417T
aa:S:E484K
aa:S:N501Y
aa:S:H655Y
aa:S:T1027I
aa:orf3a:G174C
aa:orf8:E92K
aa:N:P80R
  • P.2 requires presence of the following amino acid mutations
aa:orf1ab:L3468V
aa:orf1ab:L3930F
aa:S:E484K
aa:S:V1176F
aa:N:A119S

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