• --update-map now handles negative bp positions properly, previously this could crash or yield incorrect results.
• --adjust-file no longer produces incorrect results when extremely long allele codes are present.
• --adjust Sidak column no longer underflows to 0 around p=10^{-16}.
• --read-freq on a file with some mismatched alleles no longer tries to match with alleles from the next variant in some circumstances.
• Miscellaneous other fixes to handling of malformed inputs.