🧬 Features
- Improve support of custom data @kalletlak (#3448)
- Add Pathway Mapper to Patient View @onursumer (#3458)
- plots tab - add driver-vs-vus mode for mutation data @adamabeshouse (#3551)
- generic assay continuous data study view implementation @dippindots (#3521)
- Redis Support for cBioPortal @averyniceday (#8252)
✨ Enhancements
- (GC )hide columns for clinical tab @dippindots (#3571)
- (GC) Remove survival months attributes from the clinical table @dippindots (#3567)
- Fix Study View progress indicator behavior @onursumer (#3549)
- Modify ClinicalDataBinFilter so Jackson ignores unknown JSON properties @jtquach1 (#8246)
- Report duplicated genes when loading gene panels @oplantalech (#8096)
🐛 Bug Fixes
- Fix broken PFAM domain tooltip @onursumer (#3574)
- Fix error in loading chart data that are in user preference @kalletlak (#3573)
- SV: fix error saving user preference @kalletlak (#3564)
- Fix bug when creating comparison session from study view @adamabeshouse (#3545)
- Fix bug in mutex tab where full oql spec wasnt appearing @adamabeshouse (#3546)
- add option for excluding redisson client from war @sheridancbio (#8270)
- Filter attribute in calculating p-value when all values are same @kalletlak (#8268)
- Fix error in fetching user settings for mutiple studies @kalletlak (#8257)
🎨 Style Tweaks
- Results page: settings button should never wrap @alisman (#3541)
- Add charts style tweaks @dippindots (#3565)
- SV: Add survival chart label in the title @dippindots (#3568)
⚙️ REST API Changes
- Add new api's to support saving custom data charts @kalletlak (#7860)
📘 Documentation
- add option for excluding redisson client from war @sheridancbio (#8270)
- update file format for survival data @dippindots (#8249)
- Update Dec 31 News release @yichaoS (#8264)
- Redis Support for cBioPortal @averyniceday (#8252)
- Docs update: drop IE11 support @alisman (#8250)
🧹 Cleanup & Refactoring 🔧
- Remove empty treatment filters from study view bookmark URL @Luke-Sikina (#3569)
- Fix slow mutation query @Luke-Sikina (#8229)
👷♀️ Testing, Configuration & Deployment
- E2E test for multi study view where both studies have treatments @Luke-Sikina (#3563)
🧰 Maintenance
- Remove IE11 e2e test job @alisman (#3562)
- Upgrade mobx @adamabeshouse (#3520)
📐 Prototype
- Fix caution warning for session urls @inodb (#3572)
- Add statistical caution info to comparison clinical tab @inodb (#3570)
- add signal to portal.properties @leexgh (#8259)
🕵️♀️ Full commit logs
- Backend: v3.5.3...v3.5.4
- Frontend: cBioPortal/cbioportal-frontend@v3.5.3...v3.5.4
🏷Notes on versioning and release procedure
https://docs.cbioportal.org/4.-development/release-procedure#a-note-on-versioning