- Modify VcfToAdpc to handle multiple samples. (#1470)
- Update htsjdk to 2.21.2 (#1471)
- Fix non-symmetry bug in FingerprintChecker (#1455)
- Cleaned up javadoc... (#1434)
- Removed plain
asserts and replaced them with ValidationUtil function (#1465) - Fixed a bug where the merging of fingerprints changes the original list of fingerprints leading to incorrect results in the self-lod case when using Crosscheck without SECOND_INPUT. (#1458)
- Port CombineVcfs from picard private to picard (#1463)