- adding logging to help debug a JVM core-dump (#1387)
- Update instructions for running single tests (#1382)
- ReorderSam was having trouble when new dictionary is larger than old one (#1074)
- relaxing requirements for VCFIndex in tools that don't need one (#1295)
- Add levenshtein distance to eibc (#1331)
- Added a MIN_HISTOGRAM_WIDTH to CollectInsertSizeMetrics. (#1368)
- Adds a buffer to the index stream (#1348)
- revert base image change due to issues building on dockerhub (#1371)
- Upgrades to CompareSAMs (for functional equivalence) (#1305)