- Add arguments and reporting around recovering REF/ALT swapped alleles (#1151)
- Added reverse cycle and base dir lookup for tile metrics. (#1158)
- Allow processing of a single tile. Append tile integer to output filename to avoid overwrites by multiple tiles. (#1154)
- Add to gradle build pre-requisites check (#1156)
- Integrate @ExperimentalFeature and @BetaFeature tags (#1094)
- Yf fix infinite loop md (#1147)
- Make picardcloud accessible in docker image (#1153)
- Remove sbt & Eclipse files from gradle project (#1137)