• Update GKL to 0.8.2 (#1077)
• Better error message when dictionaries differ in GatherVcfs. (#862)
• DSDEGP-1936 Fix the DataProvider for HiSeqX so that we no longer have to create symlinks for the .locs file. (#1066)
• • added a more informative error when having problem reading a file from IntervalListTools (#1078)
• Add reject output to liftover intervals (#1068)
• Allow command line option to suppress LiftOver logging of every failed interval (#1067)
• FilterSamReads has a bug and can't filter read by read name. (#1055)