biotite-dev/biotite v0.4.0

Biotite 0.4.0

on GitHub

Changelog

• Python 3.4 and 3.5 compatibility
• Wheels for MacOS X
• Changed enum type of AppState from Flag to IntEnum
• Added class sequence.CodonTable
  • CodonTable can load NCBI codon tables
  • Removed codon table functionality from ProteinSequence
  • NucleotideSequence.translate() takes a CodonTable as optional parameter
• Removed structure.simple_view()
• Drastic performance increase in sequence.align.align_optimal() for affine gap penalty when using C-extensions
• Added structure.check_duplicate_atoms()
• Added structure.spread_residue_wise()
• Improved performance and atom array stack acceptance in structure.dihedral_backbone()