• RefSeq transcript version updated.
• When the input data format is not specified on the command line, VEP attempts to detect it. The assumed format is now reported in verbose mode (--verbose).
• VEP assigns assigned the consequence types TF_binding_site_variant, TFBS_ablation, TFBS_fusion, TFBS_amplification and TFBS_translocation to human and mouse variants which overlapped motif features. These annotations will not be available in VEP caches for human in release 94 so must be added as a custom annotation.