github broadinstitute/picard 2.22.3
on GitHub

  • Fixes CheckIlluminaDirectory problem with cbcl files and skips in the READ_STRUCTURE (#1489)
  • Add arguments for inputs and output to the ConvertSequencingArtifactToOxoG command (#1492)
  • Fixes LiftoverVCF for indels (again) (#1469)
  • Only requiring that the input VCF be indexed if an INTERVAL is provided (#1487)
  • Allow more SD inputs to LiftoverIntervals and BedToIntervalList (#1446)
  • Improvements to CompareMetrics - Now gives fuller description of differences in metrics. - Added feature to ignore differences in certain metrics. - Added ‘fuzzy’ metric comparison. - Added ability to output a differences file.
3 months ago