github broadinstitute/picard 2.18.29
on GitHub

  • Simplify BedToIntervalList by not reimplementing coordinate conversion (#1292)
  • Removing strange import in gradle.settings (#1291)
  • Updated the documentation for SortSam to be clearer in detailing Queryname-sort tie-breaking
  • Include aligned adapter reads in metrics (#1282)
  • Fix “end” tag in inverted variants in liftover VCF. (#1268)
  • Yf stratify chimeric (#1269)
  • added comment about versioning of the tiebreaking
  • catching the tool help output as well
  • responding to review comment
  • updated the documenation for SortSam where it was somewhat misleading
15 months ago